Protein ZmGRF16
ZmGRF16 is a protein in the GRF family.
Information
TF Name: ZmGRF16
Species: Maize
TF Family: GRF
Gene Name(Synonym): ZmOrphan340
Uniprot ID: A0A1D6PDQ1

Protein ZmGRF16

ZmGRF16 is a protein in the GRF family. NOTE the "Uniprot ID" shown on the right is a placeholder for testing. The interactive structure shown is based on that id.

Overview of domains present in v5 transcripts
PF08879PF08880
Zm00001eb256730_T001
Zm00001eb256730_T002

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d018260DAPseq no logo sequence fimo position
Zm00001d018260DAPseq no logo sequence fimo position
Zm00001d018260ChIPseq no logo sequence fimo position
Zm00001d018260PChIPseq no logo sequence fimo position

Interactions where ZmGRF16 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmGRF16 is the target  
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There are 195 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb256730_T001 from maize genome v5

Amino Acid Sequence
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MMMMSGRAATAGRYPFTASQWQELEHQALIYKCLASGKPIPSYLMPPLRRILDSALATSPSLAAFPPQPSLGWGGCFGMG
FSRKPADEDPEPGRCRRTDGKKWRCSKEAYPDSKYCEKHMHRGKNRSRKPVEMSLATPAPASSATSAAAAATSSSQAPSY
HSPAPAVPYHAPYGAAYHHTQTQVTMSPFHLLHLETTHPHPPPPPPPPYYYADQRDYAYGKEVGERAFFSDGAGERDRQQ
QAAGQWQFKQLGTMEATKQPCTTPLLVPAAGYGHGAASPYGVGQAKEDEEEEETRRQQQHCFVLGADLRLAERPSGAHDA
AAQKPLRHFIDEWPHEKGSNKAGSWMGGLDGETTQLSMSIPMAAAADLPVTSRYRT

MMMMSGRAATAGRYPFTASQWQELEHQALIYKCLASGKPIPSYLMPPLRRILDSALATSPSLAAFPPQPSLGWGGCFGMG
FSRKPADEDPEPGRCRRTDGKKWRCSKEAYPDSKYCEKHMHRGKNRSRKPVEMSLATPAPASSATSAAAAATSSSQAPSY
HSPAPAVPYHAPYGAAYHHTQTQVTMSPFHLLHLETTHPHPPPPPPPPYYYADQRDYAYGKEVGERAFFSDGAGERDRQQ
QAAGQWQFKQLGTMEATKQPCTTPLLVPAAGYGHGAASPYGVGQAKEDEEEEETRRQQQHCFVLGADLRLAERPSGAHDA
AAQKPLRHFIDEWPHEKGSNKAGSWMGGLDGETTQLSMSIPMAAAADLPVTSRYRT

MMMMSGRAATAGRYPFTASQWQELEHQALIYKCLASGKPIPSYLMPPLRRILDSALATSPSLAAFPPQPSLGWGGCFGMG
FSRKPADEDPEPGRCRRTDGKKWRCSKEAYPDSKYCEKHMHRGKNRSRKPVEMSLATPAPASSATSAAAAATSSSQAPSY
HSPAPAVPYHAPYGAAYHHTQTQVTMSPFHLLHLETTHPHPPPPPPPPYYYADQRDYAYGKEVGERAFFSDGAGERDRQQ
QAAGQWQFKQLGTMEATKQPCTTPLLVPAAGYGHGAASPYGVGQAKEDEEEEETRRQQQHCFVLGADLRLAERPSGAHDA
AAQKPLRHFIDEWPHEKGSNKAGSWMGGLDGETTQLSMSIPMAAAADLPVTSRYRT

MMMMSGRAATAGRYPFTASQWQELEHQALIYKCLASGKPIPSYLMPPLRRILDSALATSPSLAAFPPQPSLGWGGCFGMG
FSRKPADEDPEPGRCRRTDGKKWRCSKEAYPDSKYCEKHMHRGKNRSRKPVEMSLATPAPASSATSAAAAATSSSQAPSY
HSPAPAVPYHAPYGAAYHHTQTQVTMSPFHLLHLETTHPHPPPPPPPPYYYADQRDYAYGKEVGERAFFSDGAGERDRQQ
QAAGQWQFKQLGTMEATKQPCTTPLLVPAAGYGHGAASPYGVGQAKEDEEEEETRRQQQHCFVLGADLRLAERPSGAHDA
AAQKPLRHFIDEWPHEKGSNKAGSWMGGLDGETTQLSMSIPMAAAADLPVTSRYRT

MMMMSGRAATAGRYPFTASQWQELEHQALIYKCLASGKPIPSYLMPPLRRILDSALATSPSLAAFPPQPSLGWGGCFGMG
FSRKPADEDPEPGRCRRTDGKKWRCSKEAYPDSKYCEKHMHRGKNRSRKPVEMSLATPAPASSATSAAAAATSSSQAPSY
HSPAPAVPYHAPYGAAYHHTQTQVTMSPFHLLHLETTHPHPPPPPPPPYYYADQRDYAYGKEVGERAFFSDGAGERDRQQ
QAAGQWQFKQLGTMEATKQPCTTPLLVPAAGYGHGAASPYGVGQAKEDEEEEETRRQQQHCFVLGADLRLAERPSGAHDA
AAQKPLRHFIDEWPHEKGSNKAGSWMGGLDGETTQLSMSIPMAAAADLPVTSRYRT

MMMMSGRAATAGRYPFTASQWQELEHQALIYKCLASGKPIPSYLMPPLRRILDSALATSPSLAAFPPQPSLGWGGCFGMG
FSRKPADEDPEPGRCRRTDGKKWRCSKEAYPDSKYCEKHMHRGKNRSRKPVEMSLATPAPASSATSAAAAATSSSQAPSY
HSPAPAVPYHAPYGAAYHHTQTQVTMSPFHLLHLETTHPHPPPPPPPPYYYADQRDYAYGKEVGERAFFSDGAGERDRQQ
QAAGQWQFKQLGTMEATKQPCTTPLLVPAAGYGHGAASPYGVGQAKEDEEEEETRRQQQHCFVLGADLRLAERPSGAHDA
AAQKPLRHFIDEWPHEKGSNKAGSWMGGLDGETTQLSMSIPMAAAADLPVTSRYRT

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF08880
PF08879
Hover here to show all domains

Nucleotide Sequence
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ACCTAAGTGCTTCACTCACTCCTGT...

GRMZM5G893117_T01 from maize genome v3


Related TFome: pUT4967

Amino Acid Sequence
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MMMMSGRAATAGRYPFTASQWQELEHQALIYKCLASGKPIPSYLMPPLRRILDSALATSPSLAAFPPQPSLGWGGCFGMG
FSRKPADEDPEPGRCRRTDGKKALLQGGVPGLQVLREAHAPGQEPFKKACGNVLGHAGAGLLRHKRRRRRHLLVPGAVLP
QPGPRRAVPRALRRRVPSHADAGDDEPLPPPPPRDHPPAPAAAAAAALLLRGPEGLRLRQGGRRARLLLRRRGREGPAAA
GRGAVAVQAARDDGGDEAAVHHAAARPRRRVRPRRGVAVRRRSGQGRRGGGGNAAAAAALLRSWRRPAAGGAAVGGT

Nucleotide Sequence
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CTCACTCCTGTCCTCTCCTCTCGAC...

Zm00001d018260_T001 from maize genome v4

Amino Acid Sequence
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MMMMSGRAATAGRYPFTASQWQELEHQALIYKCLASGKPIPSYLMPPLRRILDSALATSPSLAAFPPQPSLGWGGCFGMG
FSRKPADEDPEPGRCRRTDGKKWRCSKEAYPDSKYCEKHMHRGKNRSRKPVEMSLATPAPASSATSAAAAATSSSQAPSY
HSPAPAVPYHAPYGAAYHHTQTQVTMSPFHLLHLETTHPHPPPPPPPPYYYADQRDYAYGKEVGERAFFSDGAGERDRQQ
QAAGQWQFKQLGTMEATKQPCTTPLLVPAAGYGHGAASPYGVGQAKEDEEEEETRRQQQHCFVLGADLRLAERPSGAHDA
AAQKPLRHFIDEWPHEKGSNKAGSWMGGLDGETTQLSMSIPMAAAADLPVTSRYRT

Nucleotide Sequence
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CGCGATCCAAGCCTGCCACTACAAA...

Zm00001eb256720_T001 from maize genome v5

Amino Acid Sequence
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MWPRHLEVAATTKHFLLAITHLQTAQRTKNHGRNKDMKLKRRSTRYGNSLWVHEQDVQCAPPSRTVAGGDGEVGSGRHRD
RHGELRRLAVEPPHPRPRLIAPLLVRPLVDEMPERLLRGGVMCPRRPLRQPQVGAKNEAVLLLPPRFLLLLVFLGLTDAV
RRRRAVAVPGGGDEQRRGARLLRRLHRPELLELPLPRGLLLPVPLARAVGEEGALADLLAVGVVPLVRVVVGRRRRRRRV
RVGGLEVEEVEGAHRHLRLRVMVRGAVGRVVRHGGGRAVVGRRLGRGGGGGGGACGGGGRRRRGQGHFHRLS

Nucleotide Sequence
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TCGGGTGAAGCATGGTGATTAATTA...

Zm00001eb256730_T002 from maize genome v5

Amino Acid Sequence
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MGFSRKPADEDPEPGRCRRTDGKKWRCSKEAYPDSKYCEKHMHRGKNRSRKPVEMSLATPAPASSATSAAAAATSSSQAP
SYHSPAPAVPYHAPYGAAYHHTQTQVTMSPFHLLHLETTHPHPPPPPPPPYYYADQRDYAYGKEVGERAFFSDGAGERDR
QQQAAGQWQFKQLGTMEATKQPCTTPLLVPAAGYGHGAASPYGVGQAKEDEEEEETRRQQQHCFVLGADLRLAERPSGAH
DAAAQKPLRHFIDEWPHEKGSNKAGSWMGGLDGETTQLSMSIPMAAAADLPVTSRYRT

Nucleotide Sequence
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GCTTCACTCACTCCTGTCCTCTCCT...


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